The detailed information of tRNA gene sequence


Sequence ID>SRA1005434
Genome IDSRR013521.4453
Search identical group
Phylum/ClassViral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Species
Start position on genome 145
End posion on genome 222
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acacgtacaT
tRNA gene sequence 
GTCGGCGTAGCTCAGTTGGTTAGAGCGCGGGACTCATAAGCCCGAGGTCGGAGGATCGTT
CCCTCCCGCCGACACCC
Downstream region at tRNA end position 
ttagtttttt
Secondary structure (Cloverleaf model)
>SRA1005434	Met	CAT
                   T      ACCC ttagtttttt
                     G - C
                     T - A
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          C T
                    T     C C T C C     T
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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