The detailed information of tRNA gene sequence


Sequence ID>SRA1005436
Genome IDSRR013521.6316
Search identical group
Phylum/ClassViral metagenome of the Antarctic Lake Limnopolar in spring and summer? (SRP000593)
Species
Start position on genome 113
End posion on genome 188
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
accacctttt
tRNA gene sequence 
GCCGTTTTAGCTCAGTTGGTAGAGCAACTGTTTTGTAAACAGTAGGTCCCCAGTTCGAAT
CTGGGAAGCGGCTCCA
Downstream region at tRNA end position 
aatgtttgaa
Secondary structure (Cloverleaf model)
>SRA1005436	Thr	TGT
                   t      TCCA aatgtttgaa
                     G - C
                     C - G
                     C - G
                     G - C
                     T + G
                     T - A
                     T - A          T A
                    T     G G G T C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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