The detailed information of tRNA gene sequence


Sequence ID>SRA1005439
Genome IDSRR014584.104
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 50
End posion on genome 123
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgggcttac
tRNA gene sequence 
CGCTGGATAGTGTAACGGCAACACGCGAGGCTCATATCCTTGCATTACGGGTTCGAGTCC
CGTTCCAGCTACCA
Downstream region at tRNA end position 
tttaattacc
Secondary structure (Cloverleaf model)
>SRA1005439	Met	CAT
                   c      ACCA tttaattacc
                     C   T
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     A - T          T G
                    T     T G C C C     A
        A A        A      | | | | |     G
      C     T G T G       A C G G G     C
      G     | | | |                 T T
      G     A C A C
        C A        G     CATT
                    C - G
                    G + T
                    A - T
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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