The detailed information of tRNA gene sequence


Sequence ID>SRA1005452
Genome IDSRR014584.17281
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 145
End posion on genome 72
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcaaactat
tRNA gene sequence 
GGAGGCATGGCGCAATGGTAAGCGCGAGGAACTCATAATTCCGAGGTTATAGGTTCAAGT
CCTATTGTCTCCACtc
Downstream region at tRNA end position 
tccccaccac
Secondary structure (Cloverleaf model)
>SRA1005452	Met	CAT
                   t      ACtc tccccaccac
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     A - T          T G
                    T     T A T C C     A
      T A A        G      | | | | |     A
    G       C G C G       A T A G G     C
    G       | | | |                 T T
    T       G C G C
      A A          G     AGGTT
                    A   G
                    G - C
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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