The detailed information of tRNA gene sequence


Sequence ID>SRA1005454
Genome IDSRR014584.21561
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 179
End posion on genome 255
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggaacacgg
tRNA gene sequence 
TGCAGGGTGACGCAGTGGTCTAGCGTGCAAGTCTCATAATCTTGAAGTCGCGGGTTCGAG
TCCCGCCCCTGCTACTA
Downstream region at tRNA end position 
agacaaacnn
Secondary structure (Cloverleaf model)
>SRA1005454	Met	CAT
                   g      ACTA agacaaacnn
                     T   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       C G C A       G C G G G     C
    G       | | | |                 T T
    T       G C G T
      C T A        G     AAGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    T   T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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