The detailed information of tRNA gene sequence


Sequence ID>SRA1005458
Genome IDSRR014584.31482
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 80
End posion on genome 5
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcagctaaac
tRNA gene sequence 
AGTGCGGTAGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCGAGT
CCTGCCCGCGCCACAA
Downstream region at tRNA end position 
aaggnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005458	Met	CAT
                   c      ACAA aaggnnnnnn
                     A   C
                     G - C
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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