The detailed information of tRNA gene sequence


Sequence ID>SRA1005460
Genome IDSRR014584.40599
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 97
End posion on genome 21
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aagtattgac
tRNA gene sequence 
GCCGACTTAGCTTTAACTGGTAGAGCAGTTGCCTTGTAAGCATCAGGTTGTGGGTTCGAG
TCCCGCAGTCGGCACCA
Downstream region at tRNA end position 
atcaagaggg
Secondary structure (Cloverleaf model)
>SRA1005460	Thr	TGT
                   c      ACCA atcaagaggg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T G
                    T     C G C C C     A
      A A T        A      | + | | |     G
    C       T T C G       G T G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        A     AGGTT
                    G - C
                    T   T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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