The detailed information of tRNA gene sequence


Sequence ID>SRA1005465
Genome IDSRR014584.43030
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 216
End posion on genome 140
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gctgacacct
tRNA gene sequence 
CGGATCTTAGCGCAGTCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGTAGGTTCGAA
TCCTACAGGTCCGACCA
Downstream region at tRNA end position 
gttttgccct
Secondary structure (Cloverleaf model)
>SRA1005465	Pro	TGG
                   t      ACCA gttttgccct
                     C - G
                     G - C
                     G - C
                     A - T
                     T + G
                     C - G
                     T - A          T A
                    T     C A T C C     A
      T G A        A      | | | | |     G
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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