The detailed information of tRNA gene sequence


Sequence ID>SRA1005466
Genome IDSRR014584.43030
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 134
End posion on genome 61
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gaccagtttt
tRNA gene sequence 
GCCCTGTTAGCATGAAGGTCGTGCAGTTGACTTGTAATCATCAGGCGTGAGTTCGATTCT
CTCACAGGGCACCA
Downstream region at tRNA end position 
gttttattaa
Secondary structure (Cloverleaf model)
>SRA1005466	Thr	TGT
                   t      ACCA gttttattaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     T - A          T T
                    T     C T C T C     A
        A G        A      |   | | |     G
      A     T A C G       G T G A G     C
      G     + | | |                 T T
      G     G T G C
        T C        A     AGGC
                    G - C
                    T   T
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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