The detailed information of tRNA gene sequence


Sequence ID>SRA1005471
Genome IDSRR014584.51899
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 124
End posion on genome 52
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
agatacaatt
tRNA gene sequence 
GCCTCATTAGTTAAACGGTTATAATATCTGTCTGTCGAACAGAAGTTAGGAGTTCGATTC
TCCTATGGGGCGCac
Downstream region at tRNA end position 
aaaaattgat
Secondary structure (Cloverleaf model)
>SRA1005471	Asp	GTC
                   t      GCac aaaaattgat
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C T C     A
      C A A        A      | | | | |     G
    G       A T T G       A G G A G     C
    G       | | | +                 T T
    T       T A A T
      T A          A     AGTT
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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