The detailed information of tRNA gene sequence


Sequence ID>SRA1005472
Genome IDSRR014584.52021
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 109
End posion on genome 19
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgatatacaa
tRNA gene sequence 
GGTTAGGTGGCCGAGTGGCTTATGGCAGCGCTCTTGAAAAGCGAAGTACGTTAATAGCGT
ACCGTGGGTTCAAATCCTACCCTAACCGCCA
Downstream region at tRNA end position 
aaatatagac
Secondary structure (Cloverleaf model)
>SRA1005472	Ser	TGA
                   a      GCCA aaatatagac
                     G - C
                     G - C
                     T - A
                     T - A
                     A - T
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | + | |     A
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    C       T G G C
      T T A        A     AGTACGTTAATAGCGTACC
                    G   A
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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