The detailed information of tRNA gene sequence


Sequence ID>SRA1005473
Genome IDSRR014584.52420
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 226
End posion on genome 152
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attgtaaatg
tRNA gene sequence 
GGGACTTTAGTTAAATGGTATAACACTGGCCTCATAAGCCAGCAGTTCTGGGTTCAATTC
CCAGCGGTCCCACCA
Downstream region at tRNA end position 
aacaactgtg
Secondary structure (Cloverleaf model)
>SRA1005473	Met	CAT
                   g      ACCA aacaactgtg
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     T   C          T T
                    T     G A C C C     A
        A A        A      | | | | |     A
      T     A T T G       C T G G G     C
      G     | | | |                 T T
      G     T A A C
        T A        A     CAGTT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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