The detailed information of tRNA gene sequence


Sequence ID>SRA1005475
Genome IDSRR014584.56695
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 14
End posion on genome 85
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttgggcttgt
tRNA gene sequence 
GGTTCCTTAGTTTTAATGGTAAAACGACGCTCTTGTAAGGCGTATTTCTCAGTTCAAATC
TGAGAGGAACCTtga
Downstream region at tRNA end position 
aaaattcttt
Secondary structure (Cloverleaf model)
>SRA1005475	Thr	TGT
                   t      Ttga aaaattcttt
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     G A G T C     A
      A A T        A      | | | | |     A
    T       T T T G       C T C A G     C
    G       | | | |                 T T
    G       A A A C
      T A          G     ATTT
                    A - T
                    C - G
                    G - C
                    C - G
                    T + G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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