The detailed information of tRNA gene sequence


Sequence ID>SRA1005479
Genome IDSRR014584.63654
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 161
End posion on genome 88
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agagatttat
tRNA gene sequence 
GGGCGAGTAGTGTAATGGTAACACTAGGGATTCCAAACCCCTCATTCTTGGTTCAAGTCC
AAGCTCCTCCGCAA
Downstream region at tRNA end position 
gtattgttct
Secondary structure (Cloverleaf model)
>SRA1005479	Trp	CCA
                   t      GCAA gtattgttct
                     G - C
                     G - C
                     G + T
                     C   C
                     G - C
                     A - T
                     G - C          T G
                    T     G A A C C     A
        A A        A      | | | | |     A
      T     T G T G       C T T G G     C
      G     | | | |                 T T
      G     A C A C
        T A        T     CATT
                    A - T
                    G - C
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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