The detailed information of tRNA gene sequence


Sequence ID>W1810400790
Genome IDPYGJ01000017
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesShimia abyssi DSM 100673 [PYGJ]
Start position on genome 12147
End posion on genome 12223
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
actatagacc
tRNA gene sequence 
GGCCCCGTGGCTCAACTGGATAGAGCAGCCCCCTCCTAAGGGGCAGGTTGCAGGTTCGAA
TCCTGCCGGGGTCGCCA
Downstream region at tRNA end position 
ctaaataact
Secondary structure (Cloverleaf model)
>W1810400790	Arg	CCT
                   c      GCCA ctaaataact
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C A A        G      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    G - C
                    C - G
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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