The detailed information of tRNA gene sequence


Sequence ID>W1810400792
Genome IDPYGJ01000017
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesShimia abyssi DSM 100673 [PYGJ]
Start position on genome 5962
End posion on genome 5887
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttgaaaaatt
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCTACAATGGCATTGTAGAGGTCAGGGGTTCGATC
CCCCTAGGCTCCACCA
Downstream region at tRNA end position 
aatccttctt
Secondary structure (Cloverleaf model)
>W1810400792	Ala	GGC
                   t      ACCA aatccttctt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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