The detailed information of tRNA gene sequence


Sequence ID>SRA1005485
Genome IDSRR014584.69138
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 46
End posion on genome 133
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aatgttattt
tRNA gene sequence 
GGCTCAGTGGTGGAATGGTAGACACGCCGCACTTAAAATGCTGTGGGCCGCATGGCCCGT
GAGAGTTCGAGTCTCTCCTGAGCTACAA
Downstream region at tRNA end position 
agttcattga
Secondary structure (Cloverleaf model)
>SRA1005485	Leu	TAA
                   t      ACAA agttcattga
                     G + T
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T G
                    T     C T C T C     A
      T A A        G      | | | | |     G
    G       G G T G       G A G A G     C
    G         | | |                 T T
    T       A C A C
      A G          G     TGGGCCGCATGGCCCGT
                    C - G
                    C   T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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