The detailed information of tRNA gene sequence


Sequence ID>SRA1005498
Genome IDSRR014584.98011
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 146
End posion on genome 73
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttacaaccT
tRNA gene sequence 
GGGCCTGTAGCTCAATGGCAGAGCAAGCGGCTCATAACCGCTGGGTTCCAGGTTCGAGCC
CTGGCGGGCCCATac
Downstream region at tRNA end position 
gcggcgttgg
Secondary structure (Cloverleaf model)
>SRA1005498	Met	CAT
                   T      ATac gcggcgttgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          C G
                    T     G G T C C     A
        A A        A      | | | | |     G
      T     C T C G       C C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     GGGTT
                    A - T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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