The detailed information of tRNA gene sequence


Sequence ID>SRA1005509
Genome IDSRR014584.114094
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 110
End posion on genome 194
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
atattcatat
tRNA gene sequence 
GCCTCGATGGTGGAATTGGTAGACACGCTGGTCTCAAAAATCAGTCGAAGTTAGTAGGTG
CGGGTTCGAGTCCCGCTCGAGGTACtc
Downstream region at tRNA end position 
ttttttagga
Secondary structure (Cloverleaf model)
>SRA1005509	Leu	CAA
                   t      ACtc ttttttagga
                     G + T
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TCGAAGTTAGTAGGT
                    C - G
                    T - A
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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