The detailed information of tRNA gene sequence


Sequence ID>SRA1005527
Genome IDSRR014584.140297
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 132
End posion on genome 59
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaataatcgg
tRNA gene sequence 
AGCAGGTGAGTGTCATGGCAGCATAGCACGCTCATAACGTGTTGGATCGGGTTCGATTCC
CGAACCTGCAACCA
Downstream region at tRNA end position 
attttcagat
Secondary structure (Cloverleaf model)
>SRA1005527	Met	CAT
                   g      ACCA attttcagat
                     A   A
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     T - A          T T
                    G     A G C C C     A
        A C        A      | | | | |     G
      T     T G T G       T C G G G     C
      G     + | | +                 T T
      G     G C A T
        C A        A     TGGA
                    G + T
                    C - G
                    A - T
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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