The detailed information of tRNA gene sequence


Sequence ID>SRA1005528
Genome IDSRR014584.142495
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 195
End posion on genome 120
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgtcgtttt
tRNA gene sequence 
AGCGGGGTAGCTCAGAGGCAGAGGGCCGGGCTCATAACCCGGACGGTCGCCGGTTCGATC
CCGGCCCCCGCTTCCA
Downstream region at tRNA end position 
tccgcacatg
Secondary structure (Cloverleaf model)
>SRA1005528	Met	CAT
                   t      TCCA tccgcacatg
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          C T
                    T     C G G C C     A
        G A        A      | | | | |     G
      A     C T C G       G C C G G     C
      G     | | |                   T T
      G     G A G G
        C A        G     ACGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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