The detailed information of tRNA gene sequence


Sequence ID>SRA1005533
Genome IDSRR014584.149044
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 177
End posion on genome 103
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gacaaggtct
tRNA gene sequence 
GGCCCTGTAGACTAATGGTTAAGTCACGAGACTTTCACTCTCGTAATCGGAGTTCAATCC
TCCGCAGGGTCACCA
Downstream region at tRNA end position 
tgggaaagcg
Secondary structure (Cloverleaf model)
>SRA1005533	Glu	TTC
                   t      ACCA tgggaaagcg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          C T
                    T     G C C T C     A
      T A A        A      | | | | |     A
    G       T C A G       C G G A G     C
    G       | | | |                 T T
    T       A G T C
      T A          A     TAAT
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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