The detailed information of tRNA gene sequence


Sequence ID>SRA1005535
Genome IDSRR014584.154214
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 88
End posion on genome 14
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagtaattga
tRNA gene sequence 
CGCGGGGTGGAGCAGCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGATTC
CTACCCCCGCTACCA
Downstream region at tRNA end position 
aaaagccgtc
Secondary structure (Cloverleaf model)
>SRA1005535	Met	CAT
                   a      ACCA aaaagccgtc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C A T C C     A
        G A        G      | | | | |     G
      C     C G A G       G T A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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