The detailed information of tRNA gene sequence


Sequence ID>SRA1005539
Genome IDSRR014584.165470
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 81
End posion on genome 5
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tagagttagg
tRNA gene sequence 
CCGCCGGTAGCTTAATTGGATAGAGCAACTGAATTCTAGTCAGACGGTTGAGGGTTCGAG
TCCTTCCCGGCGGGCCA
Downstream region at tRNA end position 
caaannnnnn
Secondary structure (Cloverleaf model)
>SRA1005539	Arg	TCT
                   g      GCCA caaannnnnn
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       T T C G       G A G G G     C
    G       + | | |                 T T
    G       G A G C
      A T A        A     CGGTT
                    A   A
                    C - G
                    T - A
                    G - C
                    A - T
                  A       G
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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