The detailed information of tRNA gene sequence


Sequence ID>SRA1005557
Genome IDSRR014584.183529
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 172
End posion on genome 249
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttccgattcc
tRNA gene sequence 
GGGCTCATAGCTCAATCTGGTTAGAGCAAGCGACTCATAATCGCTAGGTTCTCGGTTCGA
GTCCGAGTGAGCCCACCA
Downstream region at tRNA end position 
tttactagga
Secondary structure (Cloverleaf model)
>SRA1005557	Met	CAT
                   c      ACCA tttactagga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T G
                    T     G A G C C     A
    C T A A        A      | | | | |     G
  T         C T C G       C T C G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     AGGTT
                    A - T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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