The detailed information of tRNA gene sequence


Sequence ID>SRA1005571
Genome IDSRR014584.201769
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 103
End posion on genome 178
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgacatacag
tRNA gene sequence 
AGCGGGGTAGCGCAGCCGGTAGCGCGCAGGGTTCATACCCCTGAGGTCGGAGGTTCGAAT
CCTTCCCCCGCTACCT
Downstream region at tRNA end position 
aaaaacacca
Secondary structure (Cloverleaf model)
>SRA1005571	Met	CAT
                   g      ACCT aaaaacacca
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        A      | + | | |     G
    C       C G C G       G G A G G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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