The detailed information of tRNA gene sequence


Sequence ID>SRA1005575
Genome IDSRR014584.205432
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 199
End posion on genome 124
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctgtaagat
tRNA gene sequence 
AGCAAGGTAGAGCAGTTGGTAGCTCGTGGGACTCATACTCCCAAGGTCGCAGGTTCGAGT
CCTGTCCTTGCAACCA
Downstream region at tRNA end position 
aataagacat
Secondary structure (Cloverleaf model)
>SRA1005575	Met	CAT
                   t      ACCA aataagacat
                     A   A
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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