The detailed information of tRNA gene sequence


Sequence ID>SRA1005585
Genome IDSRR014584.212941
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 251
End posion on genome 168
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ntgaaaacta
tRNA gene sequence 
GGGGTGGTCGCATAGTGGCAATTGCACAACGCTGTAAACGTTGCGGCTTTCGGGCCTACG
TGAGTTCGAGTCTCACACGCCCCAtta
Downstream region at tRNA end position 
atctgagtca
Secondary structure (Cloverleaf model)
>SRA1005585	Tyr	GTA
                   a      Atta atctgagtca
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     G   A          T G
                    T     C A C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G A G     C
    G         | | |                 T T
    C       T T G C
      A A          A     CGGCTTTCGGGCCTAC
                    C - G
                    A - T
                    A - T
                    C - G
                    G - C
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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