The detailed information of tRNA gene sequence


Sequence ID>SRA1005588
Genome IDSRR014584.216466
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 183
End posion on genome 111
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aataaatata
tRNA gene sequence 
tGGGTCTGTAGTTTAGTGGTAAAACGGTCGTCTTCAAAACGACTCTCTGGGGGTTCAATT
CCTTACGGGCCCGCata
Downstream region at tRNA end position 
tgtataaaat
Secondary structure (Cloverleaf model)
>SRA1005588	SeC	TCA
                   a      Cata tgtataaaat
                     t + G
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     T + G
                     G - C          T T
                    T     A T T C C     A
        G A        A        + + | |     A
      T     T T T G       G G G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        G     TCTCT
                    G - C
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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