The detailed information of tRNA gene sequence


Sequence ID>SRA1005601
Genome IDSRR014584.228503
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 186
End posion on genome 114
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggttcatttt
tRNA gene sequence 
GGTAGGGTAGTCCAGCGGCTACGACGCGGGCCTCATAAGCCTGAGATCGGAGGTTCGATT
CCTCCCCCTGCCCatt
Downstream region at tRNA end position 
gcttacggga
Secondary structure (Cloverleaf model)
>SRA1005601	Met	CAT
                   t      Catt gcttacggga
                     G - C
                     G - C
                     T + G
                     A - T
                     G - C
                     G - C
                     G - C          T T
                    T     C C T C C     A
      C G A        A      | | | | |     G
    G       C C T G       G G A G G     C
    G         | | |                 T T
    C       C G A C
      T A          G     AGATC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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