The detailed information of tRNA gene sequence


Sequence ID>SRA1005611
Genome IDSRR014584.247284
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 199
End posion on genome 126
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggcagaaaga
tRNA gene sequence 
CCGGGGGTAGTGTAAAGGCAGCACAAGTGTCTCATAAGCACTTAGACATGGTTCGAATCC
ATGCCTCCGTACCA
Downstream region at tRNA end position 
aatagatttc
Secondary structure (Cloverleaf model)
>SRA1005611	Met	CAT
                   a      ACCA aatagatttc
                     C   T
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     G T A C C     A
        A A        A      | | | | |     G
      A     T G T G       C A T G G     C
      G     + | | |                 T T
      G     G C A C
        C A        A     TAGA
                    A - T
                    G - C
                    T - A
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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