The detailed information of tRNA gene sequence


Sequence ID>SRA1005616
Genome IDSRR014585.46097
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 150
End posion on genome 61
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttacgcacat
tRNA gene sequence 
GGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGTCCT
CCGTGAGTTCGAATCTCACCGCTTCCGCCA
Downstream region at tRNA end position 
aattcaagtt
Secondary structure (Cloverleaf model)
>SRA1005616	Ser	TGA
                   t      GCCA aattcaagtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T T A        A     CGAGGGTGTGAGTCCTCC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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