The detailed information of tRNA gene sequence


Sequence ID>SRA1005621
Genome IDSRR014585.87490
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 136
End posion on genome 211
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctgcgccac
tRNA gene sequence 
GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGTTGGTTCAAAC
CCAACAGGGGCCACCA
Downstream region at tRNA end position 
aataaaacaa
Secondary structure (Cloverleaf model)
>SRA1005621	Met	CAT
                   c      ACCA aataaaacaa
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          C A
                    T     C A A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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