The detailed information of tRNA gene sequence


Sequence ID>SRA1005627
Genome IDSRR014586.6873
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 109
End posion on genome 36
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttattcaa
tRNA gene sequence 
TGCGGGGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCCGGTTCGAGT
CCGGCCCCCGCCACac
Downstream region at tRNA end position 
acccacgcgg
Secondary structure (Cloverleaf model)
>SRA1005627	Met	CAT
                   a      ACac acccacgcgg
                     T   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T G A        G      | | | | |     G
    T       C G A G       G C C G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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