The detailed information of tRNA gene sequence


Sequence ID>SRA1005628
Genome IDSRR014586.10071
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 165
End posion on genome 92
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctacacacca
tRNA gene sequence 
GGGAACTTGGTCTAATGGTATGACGACGGTCTCCAAAACCGTAAGTGGAGGTTCGATTCC
TTCAGGTCCCGCAA
Downstream region at tRNA end position 
tgaactctta
Secondary structure (Cloverleaf model)
>SRA1005628	Trp	CCA
                   a      GCAA tgaactctta
                     G - C
                     G - C
                     G - C
                     A - T
                     A   G
                     C - G
                     T - A          T T
                    T     C T T C C     A
        A A        G      | + | | |     G
      T     T C T G       G G A G G     C
      G       | | |                 T T
      G     T G A C
        T A        G     AAGT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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