The detailed information of tRNA gene sequence


Sequence ID>SRA1005635
Genome IDSRR014586.26056
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 140
End posion on genome 216
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggaacacgg
tRNA gene sequence 
TGCAGGGTGACGCAGAGGTCTAGCGTGCGAGTCTCATAATCTCGAAGTCGCGGGTTCGAA
TCCCGCCCCTGCTACTA
Downstream region at tRNA end position 
gaaagccaaa
Secondary structure (Cloverleaf model)
>SRA1005635	Met	CAT
                   g      ACTA gaaagccaaa
                     T   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       C G C A       G C G G G     C
    G       | | | |                 T T
    T       G C G T
      C T A        G     AAGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    T   T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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