The detailed information of tRNA gene sequence


Sequence ID>SRA1005642
Genome IDSRR014586.49308
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 44
End posion on genome 118
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tgttcgcaaa
tRNA gene sequence 
GGAGCGTTCGTCTAGGGGTCAGGACGCCAGCCTCTCACGCTGGAAACACGGGTTCGATTC
CCGTACGCTCTACCA
Downstream region at tRNA end position 
gatcgctcac
Secondary structure (Cloverleaf model)
>SRA1005642	Glu	CTC
                   a      ACCA gatcgctcac
                     G + T
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T T
                    T     T G C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C A          G     AAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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