The detailed information of tRNA gene sequence


Sequence ID>SRA1005653
Genome IDSRR014586.82348
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 20
End posion on genome 91
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aataaatata
tRNA gene sequence 
tGGGTCTGTAGTTTAGTGGTAAAACGGTCGTCTTCAAAACGACTCTCTGGGGTTCAATTC
CTTACGGGCCCGCata
Downstream region at tRNA end position 
tgtataaaat
Secondary structure (Cloverleaf model)
>SRA1005653	SeC	TCA
                   a      Cata tgtataaaat
                     t + G
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     T + G
                     G - C          T T
                    T     A T T C C     A
        G A        A      | + + | |     A
      T     T T T G       T G G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        G     TCTC
                    G - C
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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