The detailed information of tRNA gene sequence


Sequence ID>SRA1005671
Genome IDSRR014586.116823
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 243
End posion on genome 315
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aataaatata
tRNA gene sequence 
tGGGTCTGTAGTTTAGTGGTAAAACGGTCGTCTTCAAAACGACTCTCTGGGGGTTCAATT
CCTTACGGGCCCGCata
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1005671	SeC	TCA
                   a      Cata nnnnnnnnnn
                     t + G
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     T + G
                     G - C          T T
                    T     A T T C C     A
        G A        A        + + | |     A
      T     T T T G       G G G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        G     TCTCT
                    G - C
                    T - A
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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