The detailed information of tRNA gene sequence


Sequence ID>SRA1005672
Genome IDSRR014586.117063
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 106
End posion on genome 179
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ggttttttat
tRNA gene sequence 
AGGTCATTAGTGTAATGGTAGCACAACGGACTCCAAACCCGTTTGTAAATGTTCGAATCG
TTTATGACCTGCAA
Downstream region at tRNA end position 
ttatttcgag
Secondary structure (Cloverleaf model)
>SRA1005672	Trp	CCA
                   t      GCAA ttatttcgag
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     T - A          T A
                    T     T T T G C     A
        A A        A      | | | + |     G
      T     T G T G       A A A T G     C
      G     + | | |                 T T
      G     G C A C
        T A        A     TTGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A   C
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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