The detailed information of tRNA gene sequence


Sequence ID>SRA1005676
Genome IDSRR014586.118424
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 40
End posion on genome 113
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cggctttatt
tRNA gene sequence 
GGCTAATTAATCAAGCGGTAAGATAACGGTCTGCACAACCGTGTTCACTGGTTCGATTCC
AGTATTAGCCTCGA
Downstream region at tRNA end position 
atgcagttcg
Secondary structure (Cloverleaf model)
>SRA1005676	Cys	GCA
                   t      TCGA atgcagttcg
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     A - T
                     T - A          T T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     A C T A       A C T G G     C
      G       | | |                 T T
      G     A G A T
        T A        A     GTTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       C
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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