The detailed information of tRNA gene sequence


Sequence ID>SRA1005683
Genome IDSRR014586.130423
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 165
End posion on genome 90
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcagctaaac
tRNA gene sequence 
AGTGCGGTAGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGCAGGTTCGAGT
CCTGCCCGCGCCACAA
Downstream region at tRNA end position 
aaggtaggat
Secondary structure (Cloverleaf model)
>SRA1005683	Met	CAT
                   c      ACAA aaggtaggat
                     A   C
                     G - C
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C G A G       G C A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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