The detailed information of tRNA gene sequence


Sequence ID>SRA1005685
Genome IDSRR014586.132330
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 227
End posion on genome 152
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnccaaataa
tRNA gene sequence 
TGACATGTAGGACAATTGGTAGTCCACCTCCCTGTTAAGGAGAATGTTATGGGTTCGAGC
CCCATCGTGTCAGCCA
Downstream region at tRNA end position 
tgtggaagca
Secondary structure (Cloverleaf model)
>SRA1005685	Asn	GTT
                   a      GCCA tgtggaagca
                     T - A
                     G - C
                     A - T
                     C - G
                     A - T
                     T + G
                     G - C          C G
                    T     T A C C C     A
      T A A        A      | | | | |     G
    T       C A G G       A T G G G     C
    G       | | | |                 T T
    G       G T C C
      T A          A     ATGTT
                    C   A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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