The detailed information of tRNA gene sequence


Sequence ID>SRA1005686
Genome IDSRR014586.133037
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 4
End posion on genome 79
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnttc
tRNA gene sequence 
AAGGGCGTGGCGCAGTCCGGCTAGCGCGCTTGCTTTGGGAGCAAGAGGCCGTAGGTTCGA
ATCCTATCGCCCCGACtt
Downstream region at tRNA end position 
gtatgcatgt
Secondary structure (Cloverleaf model)
>SRA1005686	Pro	TGG
                   c      ACtt gtatgcatgt
                     A   G
                     A   C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A T C C     A
    C T G A        G      + | | | |     G
  C         C G C G       G T A G G     C
  G         | | | |                 T T
  G         G C G C
    C T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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