The detailed information of tRNA gene sequence


Sequence ID>SRA1005689
Genome IDSRR014586.139896
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 258
End posion on genome 183
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnnccat
tRNA gene sequence 
GCTCCTTTAGCTCAGTTGGAAGAGCGCCTGTTTTACACACAGGATGCCGTGGGTTCGAAT
CCTGCAAGGAGTACCA
Downstream region at tRNA end position 
tgaccggcct
Secondary structure (Cloverleaf model)
>SRA1005689	Val	TAC
                   t      ACCA tgaccggcct
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A
                     T - A          T A
                    T     C G T C C     A
      T G A        A      | + + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     ATGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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