The detailed information of tRNA gene sequence


Sequence ID>SRA1005697
Genome IDSRR014586.151617
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 221
End posion on genome 145
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggaacacgg
tRNA gene sequence 
TGCAGGGTGACGCAGTGGTCTAGCGTGCAAGTCTCATAATCTTGAAGTCGCGGGTTCGAA
TCCCGCCCCTGCTACAA
Downstream region at tRNA end position 
agacaaacga
Secondary structure (Cloverleaf model)
>SRA1005697	Met	CAT
                   g      ACAA agacaaacga
                     T   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       C G C A       G C G G G     C
    G       | | | |                 T T
    T       G C G T
      C T A        G     AAGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    T   T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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