The detailed information of tRNA gene sequence


Sequence ID>SRA1005705
Genome IDSRR014586.159229
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 69
End posion on genome 145
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cacgatttta
tRNA gene sequence 
GCGCTCGTAGCTCAACCGGATAGAGCACAAACCTTCTAAGTTTTGGGTTGCAGGTTCGAG
ACCTGCCGAGTGCGCCA
Downstream region at tRNA end position 
aggatttaaa
Secondary structure (Cloverleaf model)
>SRA1005705	Arg	TCT
                   a      GCCA aggatttaaa
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          A G
                    T     C G T C C     A
      C A A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    C   T
                    A - T
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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