The detailed information of tRNA gene sequence


Sequence ID>SRA1005715
Genome IDSRR014586.188842
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 79
End posion on genome 154
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaaggtat
tRNA gene sequence 
CGCGAGATGGAGCAGTCGGTAGCTCGGTAGACTCATACTCTACAGGTCGCGGGTTCGAGT
CCCGCTCTCGCAACAA
Downstream region at tRNA end position 
aatttgagaa
Secondary structure (Cloverleaf model)
>SRA1005715	Met	CAT
                   t      ACAA aatttgagaa
                     C   A
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T G
                    T     C G C C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C G G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  C       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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