The detailed information of tRNA gene sequence


Sequence ID>SRA1005720
Genome IDSRR014586.196911
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 4
End posion on genome 79
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnncat
tRNA gene sequence 
TGCGAGGTGGAGCAGTTGGTAGCTCGCTAGGCTCATAACCTAGAGGTCGCTGGTTCAAGT
CCAGCCCTCGCACCCA
Downstream region at tRNA end position 
tagcaaaagg
Secondary structure (Cloverleaf model)
>SRA1005720	Met	CAT
                   t      CCCA tagcaaaagg
                     T - A
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     C G A C C     A
      T G A        G      | | | | |     A
    T       C G A G       G C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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