The detailed information of tRNA gene sequence


Sequence ID>SRA1005721
Genome IDSRR014586.197739
Search identical group
Phylum/ClassMetagenomic analysis of viruses in reclaimed water (SRP000673)
Species
Start position on genome 154
End posion on genome 227
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tctttctcat
tRNA gene sequence 
TGCCGGGTGGTGTAGTGGCAGCACGACAGGCTCATAACCTGTAGACCGAGGTTCGATTCC
TCGCCCCGCAACCA
Downstream region at tRNA end position 
tatgcctgtc
Secondary structure (Cloverleaf model)
>SRA1005721	Met	CAT
                   t      ACCA tatgcctgtc
                     T - A
                     G - C
                     C - G
                     C   C
                     G - C
                     G - C
                     G - C          T T
                    T     G C T C C     A
        G A        G      | | | | |     G
      T     T G T G       C G A G G     C
      G     + | | |                 T T
      G     G C A C
        C A        G     AGAC
                    A - T
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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